PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG031600.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WOX

Protein Properties

Length: 257aa MW: 26296.5 Da PI: 8.4653

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG031600.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.5	9.3e-08	14	40	35	57
HHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 35 kkl....gLterqVkvWFqNrRakekk 57 k l + +++V++WFqNrR + ++ TRIDC4BG031600.4 14 KLLerfgAVGDANVFYWFQNRRSRSRR 40 444555568899************997 PP
2	Wus_type_Homeobox	62.1	1.2e-20	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC4BG031600.4 1 MVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MVNPPKDETV RIRKLLERFG AVGDANVFYW FQNRRSRSRR RQRQMQAAAA AAAAAAAAAS 60 SATANSLPAA SATIGLPSGT GSVHPMAIGG CASQYEQQAT SSSSSGSTGG SSLGPFAAHG 120 AGVPGAGVGY LQASCGTSSP LASGLMADVD TGGSDDLFAI SRQMGFVGSP AGPSSSAPST 180 AVQQQYYSCQ LPAATITVFI NGVPMEVPRG PIDLRAMFGQ DVVLLHSTGT LLPVNDYGIL 240 IQSLQMGESY FLVSRQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	1e-22	WOX family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG031600.4