PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG033620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 247aa    MW: 27245.2 Da    PI: 9.3395
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG033620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.61.6e-081378164
          trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykki 64
                      rW++ e+ aL++a  ++  r +r++l++ +W  v +++  +++ ++r+  qC+ ++  l+++yk +
  TRIDC4BG033620.1 13 RWSDGETSALLDAWGQIYLRRNRSSLRMDDWLTVCRAVnaHRGDLNRTLAQCRTRLCTLKQKYKVE 78
                      8*************************************8888899******************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MTSRKTGPGA GGRWSDGETS ALLDAWGQIY LRRNRSSLRM DDWLTVCRAV NAHRGDLNRT  60
LAQCRTRLCT LKQKYKVEVA KGLPALGSPH LARLRGFLAD SKFSNGPPPG FDGKTPAAAV  120
KMEEEEEEEG EEEASGCVGG SAGRSEVPVK RQRHFSSLRD ILERSGDPSL AKTPATVCCG  180
CELVGGSATG VTKLVAEIRK VAEVHERVEM ERHKFKKEMQ MLKMMELKDV RLEHKKVKEN  240
PKEADGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-11Trihelix family protein