PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG034110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 259aa    MW: 28593.1 Da    PI: 7.1618
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG034110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.91.9e-1680131155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a++k++g
  TRIDC4BG034110.1  80 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAALKFRG 131
                       78****************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
LIIWRLCGGF SSVYLGGYEK EDRAARAYDL AALKYWGVNA TTNFPKENYI RELEEMQNMS  60
RQELVASLRR KSSGFSRGAS VYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFATEEEAAE  120
AYDIAALKFR GDNAVTNFEP SRYNLEAIAR SDLPVNGRRM SSHKPAAAPA PEAQGEITFV  180
SSALPIPQQS GSDVQVPPYV LHGLLQLQAS EPLHALPLSS YSFGEPSFYW PFGDVEQKVQ  240
LDSKVEVAGG ILQLANSAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65510.13e-58AP2 family protein