PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG034270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 318aa    MW: 35292.3 Da    PI: 4.5677
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG034270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.31.7e-182269148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd llv++++ +G g+W++ ar  g++Rt+k+c++rw++yl
  TRIDC4BG034270.1 22 RGPWTVEEDILLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 69
                      89********************************************97 PP
2Myb_DNA-binding51.32.6e-1675118146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC4BG034270.1  75 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118
                       7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDMAHERDSS SEEEVMAGDL RRGPWTVEED ILLVNYIAAH GEGRWNSLAR SAGLKRTGKS  60
CRLRWLNYLR PDLRRGSITP QEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV  120
QKHAKQLKCD VNSQQFKDVM RYLWMPRLVE RIQAEAVQTA ADTPLSWQHG ADDALYESPE  180
LPVDACWPAE YAAVAGGQLP NASVAELSST TTAGSSSPST TDSGAGAQPS WPAAVDGAEW  240
FTTACDASSA AATMCDTDQL IQQQQQQAPS QLAGAWTSEP LPSLGFPELG VADFEIGSLD  300
VDSIWSMDDL WYTQPQFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-84MYB family protein