PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG034270.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 201aa    MW: 22596.4 Da    PI: 9.9494
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG034270.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.3e-192067148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd llv++++ +G g+W++ ar  g++Rt+k+c++rw++yl
  TRIDC4BG034270.3 20 RGPWTVEEDILLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 67
                      89********************************************97 PP
2Myb_DNA-binding52.41.2e-1673116146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  TRIDC4BG034270.3  73 RGSITPQEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116
                       7889******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAHERDSSSE EEVMAGDLRR GPWTVEEDIL LVNYIAAHGE GRWNSLARSA GLKRTGKSCR  60
LRWLNYLRPD LRRGSITPQE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK  120
HAKQLKCDVN SQQFKDVMRY LWMPRLVERI QAEAVQTAYA AVAGGQLPNA SVAELSSTTT  180
AGSSSPSTTD SGAGAQPSWP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-84MYB family protein