PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG036580.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 185aa MW: 19894.8 Da PI: 9.0538

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG036580.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00063	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++Fs+ L H +H TRIDC4BG036580.2 50 FECKTCNRRFSSFQALGGHRASH 72 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
RSRQQAETTS VSLMDLDGGD MARILVIFSG HHNTHGHHGI AGPAPPERVF ECKTCNRRFS 60 SFQALGGHRA SHKKPRLADG EPPKPKVHGC SICGLEFAVG QALGGHMRRH RAVAAAGAGV 120 ERGLSLDLDL GPRDHGKKKT TAVAAGLMID LNMPALALEE EEPADRAKLG LAVEMQFPMV 180 VDFRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	7e-20	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG036580.2