PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG038290.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 561aa    MW: 59865.2 Da    PI: 5.1321
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG038290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS308.41.6e-941225131373
              GRAS   1 lvelLlecAeavss..gdlelaqalLarlsel.aspdgd....pmqRlaayfteALaarlar..svselykalppsetseknsseelaalklf 84 
                       l +lL+++Aea+s   ++ ela+ +L rl+e+ +s +g+    +m+Rlaa+ft AL+  l +  sv +++++ ++ +++++++ ++l+a++++
  TRIDC4BG038290.1 122 LLHLLMAAAEALSGphKSRELARVILVRLKEMvSSTSGNagasNMERLAAHFTDALQGLLDGshSVAGTSRQAAMAASHHHSTGDVLTAFQML 214
                       579**********8557777************555555566669****************99556677888888888888889********** PP

              GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvp 175
                       +++sP++kf+h+taNqaIleav+g++rvHi+D+d+ +G+QW++L+qa++sRp   +pp+lRiT++ ++  g +++++e g+rLa fA ++g p
  TRIDC4BG038290.1 215 QDMSPYMKFGHFTANQAILEAVAGDRRVHIVDYDLAEGIQWASLMQAMTSRPdgVSPPHLRITAITRSGGGGARAVQEAGRRLAAFAGSIGQP 307
                       ****************************************************6666***********7777********************** PP

              GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnse..........sFlerf 257
                       f+f     ++ e +++ + r+ +gE+l+ n++l+       +v  +     ++L  + sl +kvv+vve+e + +++           F+ rf
  TRIDC4BG038290.1 308 FSFGHCRLDSDERFRPATVRMVKGETLVANCILHQAAAT-TTVRRPTgSVASFLTGMASLGAKVVTVVEEEGEAEKSeeeasdaaagGFVGRF 399
                       ****99999**********************99665554.333333347899*******************9885555899999999****** PP

              GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                       +e l+ ysa+ dslea++p++s+ r  vEr++lg++i  +v+ + +    + e  + W e+++ +GF+ vpls ++ +qa+lll  ++ dgy+
  TRIDC4BG038290.1 400 MEELHRYSAVWDSLEAGFPTQSRVRGLVERVILGPNIAGAVSRAYRG--TDGEGRRGWGEWMRGSGFEMVPLSCFNHSQARLLLGLFN-DGYT 489
                       ******************************************99887..899999*********************************.**** PP

              GRAS 351 veee.sgslvlgWkdrpLvsvSaW 373
                       vee   + +vlgWk r+L+s+S+W
  TRIDC4BG038290.1 490 VEETrPNKIVLGWKARRLLSASVW 513
                       **87367788************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 561 aa     Download sequence    
MDVTMEDVVG DLEISGYSSI STSPSSSLDD GMGLYGWNAL SPVADWGLFS SDDGGHDLHG  60
LIESMLCDDT LIGKPDEHPT MFTDGPCYSN ASDPSSTTTT NPGTPVQHDD MPDCNPEKGL  120
RLLHLLMAAA EALSGPHKSR ELARVILVRL KEMVSSTSGN AGASNMERLA AHFTDALQGL  180
LDGSHSVAGT SRQAAMAASH HHSTGDVLTA FQMLQDMSPY MKFGHFTANQ AILEAVAGDR  240
RVHIVDYDLA EGIQWASLMQ AMTSRPDGVS PPHLRITAIT RSGGGGARAV QEAGRRLAAF  300
AGSIGQPFSF GHCRLDSDER FRPATVRMVK GETLVANCIL HQAAATTTVR RPTGSVASFL  360
TGMASLGAKV VTVVEEEGEA EKSEEEASDA AAGGFVGRFM EELHRYSAVW DSLEAGFPTQ  420
SRVRGLVERV ILGPNIAGAV SRAYRGTDGE GRRGWGEWMR GSGFEMVPLS CFNHSQARLL  480
LGLFNDGYTV EETRPNKIVL GWKARRLLSA SVWAPPPLSV PSSPAEGVCQ PMGMAPASGG  540
FGRTEYDYVD SFLVEPAYAL V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.13e-94GRAS family protein