PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG038300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 243aa    MW: 25126.8 Da    PI: 5.2743
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG038300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.5e-174594255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      ++kGVr ++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  TRIDC4BG038300.1 45 QFKGVRMRS-WGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 94
                      69****998.**********7.....335************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MVKNHPGSGT SRCDAAAAMA ESGGGGGTAA LCGGGSRQPA MAARQFKGVR MRSWGSWVSE  60
IRAPHQKRRI WLGSYATPEA AARAYDAALL CLKGSDAVLN FPSSSSASPS SPHSLPSPAN  120
RHADDLSPRS IQRAAAAAAA AFEATRIVVD DSCSSSGEAT TPTSFSVSTL GSADVQEHAT  180
SSMSAAASAG SPVGDQDELW TELDAFASPK LMDLIAAGHA TPFSCTWEEP EEDGDMMRLW  240
SFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.14e-20ERF family protein