PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG038940.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 555aa MW: 60755 Da PI: 6.623

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG038940.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	94.4	1.4e-29	49	142	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA+++GF++r+s+ +s+r+++i++r+ vCskeg+re + kk + k++r+r+ tr+gCka+++vkk+++gkw+v+k+e+eHnH+l TRIDC4BG038940.6 49 EFYSLYARHAGFRIRISRYCRSRRDNSIISRQIVCSKEGFREVRAKKeitdEGKTKRPRMITRVGCKAMIVVKKMNSGKWMVSKFEKEHNHSL 141 6****************************************99999998899999********************************99 PP FAR1 90 a 90 TRIDC4BG038940.6 142 L 142 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
LTGLHRAFTA MEISSNEPSE VENIIGHEDD TELTPCEGME FESEDAAREF YSLYARHAGF 60 RIRISRYCRS RRDNSIISRQ IVCSKEGFRE VRAKKEITDE GKTKRPRMIT RVGCKAMIVV 120 KKMNSGKWMV SKFEKEHNHS LLSSKQAPST SNITSGENAE SAAKSSDPDE AKVEEYSAGI 180 QCNSTDSLTV LYNKLCQEAI KFAKEGSVTE EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR 240 GVSGSESKHK VVQMKTMSAS QCSDVAKQKT IPSQLTMFQE STSKLMFIPT NLLTDSGLAN 300 SDNNHPSSCA FTSSGRQGRH GSECSYLHAE NRKEGCPEKY QNSTSSRATQ GNHSTYHGHS 360 EETTVAIPAI PLTLYMPLSR NSPGASADGQ YKLLAAPIEA VPISYRPAEP IRQPKRSFCN 420 LGPLPGVMSE LTRREKGPHP LVHATALACG ARVVPVEEAA SLIKAIESKI RSGGAKIARL 480 PSSRLTRLVP EAVSMSSSSE DGEENDHSEP PAVNVEGYCH DDQISEEMKL QGEASELETD 540 SENCSGHENH DTADC

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

LTGLHRAFTA MEISSNEPSE VENIIGHEDD TELTPCEGME FESEDAAREF YSLYARHAGF  60
RIRISRYCRS RRDNSIISRQ IVCSKEGFRE VRAKKEITDE GKTKRPRMIT RVGCKAMIVV  120
KKMNSGKWMV SKFEKEHNHS LLSSKQAPST SNITSGENAE SAAKSSDPDE AKVEEYSAGI  180
QCNSTDSLTV LYNKLCQEAI KFAKEGSVTE EIYHVAMSAL KEAAEKVAQV KSCHPIMPHR  240
GVSGSESKHK VVQMKTMSAS QCSDVAKQKT IPSQLTMFQE STSKLMFIPT NLLTDSGLAN  300
SDNNHPSSCA FTSSGRQGRH GSECSYLHAE NRKEGCPEKY QNSTSSRATQ GNHSTYHGHS  360
EETTVAIPAI PLTLYMPLSR NSPGASADGQ YKLLAAPIEA VPISYRPAEP IRQPKRSFCN  420
LGPLPGVMSE LTRREKGPHP LVHATALACG ARVVPVEEAA SLIKAIESKI RSGGAKIARL  480
PSSRLTRLVP EAVSMSSSSE DGEENDHSEP PAVNVEGYCH DDQISEEMKL QGEASELETD  540
SENCSGHENH DTADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-30	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG038940.6