PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG038990.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 985aa MW: 112475 Da PI: 6.5143

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG038990.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.1	1.4e-18	105	211	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkek.dg 74 Y++YA ++GF+ ++++ ++ +g +++tf C++ gk++e + ek+ r+++ ++tgCka+l ++ ++ ++ TRIDC4BG038990.2 105 LYKAYAFRMGFHAVRRTCHNY--EGIRYRSTFSCTQAGKSREGAATpsedsgaryplrnkrgaatPEKRARRTTAEKTGCKAMLIIRDKRvND 195 7*********999998887..7889**********9999999***********9877777888899********999 PP FAR1 75 kwevtkleleHnHela 90 +w+v+ ++leHnH+++ TRIDC4BG038990.2 196 RWKVEFVDLEHNHPCT 211 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 985 aa Download sequence
SERPPHSRAT QAQNPSCEEE EAAAAAGRVK DEIADDLNAD PAEDEDEEEV VVEEGEDEVL 60 VASDDDDGAA DGAGGGENFV PRTLEEALVP RVGTVFDSVD EAFSLYKAYA FRMGFHAVRR 120 TCHNYEGIRY RSTFSCTQAG KSREGAATPS EDSGARYPLR NKRGAATPEK RARRTTAEKT 180 GCKAMLIIRD KRVNDRWKVE FVDLEHNHPC TPDMVRFLKA YREMPESAKK KAKITVEMDE 240 MVEKSLSEIA ETRKFPTRPK RSLSGGAAAG GLRFNRTDSF VQRFGDEDLI AVKKFIEMMQ 300 EKKPNFIHSW DLDQESRMKN FFWTDLRSQA QYRYFGDVIS LDVMYLQHSR ASLPLATLLG 360 VNNHGHLVLL GCGLLSKDSK ENYVWLLKRW LSCMNGKPPE AITTSYSDVV AEAVSEVLPD 420 ARHRFCFWHI LKKLQENVGR THEKEAISLR FKEVVYDTVT LTDFEKEWEA MVEHYKLKDN 480 EWFSALYSCR KQWAPGYVNH SFWAGTSAIR KVEKPDPYFD GVVTSKTTLP VFLEQYETTL 540 RGKLEREAYD DLRSYYSRLT LLSGLPFEEQ LLELYTVPMF QAFQDEIKQL MHVICKEVDR 600 SGNSITYMVS ELIQGKKVDY TVVYNNSDKD VWCICRSFPS RGILCSHALS VLKQENVLML 660 PSKYILSRWR KDFRIIHASA SSNSVALQRD SSIFDDLYVR GHEYLEDVID IGAREPELKE 720 FVLSAMKEAK GKLVRPGQTQ QGDQRVDVNM AVTGQVSADR RVDVNMASNT TSIIHRDRRV 780 EANMPLNTRA LVHEDNMASN MPSLIHGDRR ADMEMQTPHL IHREGRVDMN MTAPHLMQRE 840 RRVDVNMTSP HLIHGDRRVD MNLGSPHFIH SDRRVDMNLT SPHLIHGDRR VDMNMASPHL 900 IHGDRRVDMN MTSPHDDAMH TFDLANVNLE SSLPMAATDF MQMHPHPPVY HPKQLLNMRD 960 QVMDSNKRSN VETNTYFIGG GMHVG

Sequence ? help Back to Top

Protein Sequence Length: 985 aa Download sequence

SERPPHSRAT QAQNPSCEEE EAAAAAGRVK DEIADDLNAD PAEDEDEEEV VVEEGEDEVL  60
VASDDDDGAA DGAGGGENFV PRTLEEALVP RVGTVFDSVD EAFSLYKAYA FRMGFHAVRR  120
TCHNYEGIRY RSTFSCTQAG KSREGAATPS EDSGARYPLR NKRGAATPEK RARRTTAEKT  180
GCKAMLIIRD KRVNDRWKVE FVDLEHNHPC TPDMVRFLKA YREMPESAKK KAKITVEMDE  240
MVEKSLSEIA ETRKFPTRPK RSLSGGAAAG GLRFNRTDSF VQRFGDEDLI AVKKFIEMMQ  300
EKKPNFIHSW DLDQESRMKN FFWTDLRSQA QYRYFGDVIS LDVMYLQHSR ASLPLATLLG  360
VNNHGHLVLL GCGLLSKDSK ENYVWLLKRW LSCMNGKPPE AITTSYSDVV AEAVSEVLPD  420
ARHRFCFWHI LKKLQENVGR THEKEAISLR FKEVVYDTVT LTDFEKEWEA MVEHYKLKDN  480
EWFSALYSCR KQWAPGYVNH SFWAGTSAIR KVEKPDPYFD GVVTSKTTLP VFLEQYETTL  540
RGKLEREAYD DLRSYYSRLT LLSGLPFEEQ LLELYTVPMF QAFQDEIKQL MHVICKEVDR  600
SGNSITYMVS ELIQGKKVDY TVVYNNSDKD VWCICRSFPS RGILCSHALS VLKQENVLML  660
PSKYILSRWR KDFRIIHASA SSNSVALQRD SSIFDDLYVR GHEYLEDVID IGAREPELKE  720
FVLSAMKEAK GKLVRPGQTQ QGDQRVDVNM AVTGQVSADR RVDVNMASNT TSIIHRDRRV  780
EANMPLNTRA LVHEDNMASN MPSLIHGDRR ADMEMQTPHL IHREGRVDMN MTAPHLMQRE  840
RRVDVNMTSP HLIHGDRRVD MNLGSPHFIH SDRRVDMNLT SPHLIHGDRR VDMNMASPHL  900
IHGDRRVDMN MTSPHDDAMH TFDLANVNLE SSLPMAATDF MQMHPHPPVY HPKQLLNMRD  960
QVMDSNKRSN VETNTYFIGG GMHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG038990.2