PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG039680.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 136aa    MW: 13710.6 Da    PI: 8.2902
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG039680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.71.1e-3934132198
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                       +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq++ l +
  TRIDC4BG039680.1  34 PCGACKFLRRKCVSECIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLQIPAHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVSLLWE 126
                       7***********************9989***************************************************************99 PP

            DUF260  93 elallk 98 
                       e++++k
  TRIDC4BG039680.1 127 EINTAK 132
                       999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
GGSSTLGGCG GPSGSGSGSG GVGGGGLGGG GGGPCGACKF LRRKCVSECI FAPYFDSEQG  60
AAHFAAVHKV FGASNVSKLL LQIPAHKRLD AVVTICYEAQ ARLRDPVYGC VAHIFALQQQ  120
VSLLWEEINT AKPSNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.13e-53LBD family protein