PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG040390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 798aa MW: 87967.3 Da PI: 5.1818

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG040390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.2e-08	88	130	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + q++++++ + TRIDC4BG040390.1 88 AWTRQEEESFFNALRQVGKN-FEKITLRVQ-SKNKDQVRHYYYRL 130 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
FLQIPNSPIS KFPQTVENFV PDRNLLAALP DRHHEKSRDI CAANVMEKEV YEEMSPPPQP 60 VDLPDATPPS ASDPSQKPAK KATRQWAAWT RQEEESFFNA LRQVGKNFEK ITLRVQSKNK 120 DQVRHYYYRL VRRMKKLLGP GFSLDARNSK DTIAAMLRWW SLLEKFSCSA SKLHLKPRRF 180 KTFVDALGNQ LIKDRKRTRR KCSLGDTRLS SSSPVLSKTP GNQSFAVGLL PMDAQNGSKG 240 ASSKGAFMKR VAESNSNKSG VIRGDLSATR TVRQKRRAGG AGACAAYKKW ERAAMAGVSL 300 VADAAEELER KMTTQNLSCN ADATVLASSP NNVSTVDDAG TNHMKEADPQ APSKLKLQLF 360 PINEATRKAL EKDDHNPHLE LTLSSKKKMS SVLEHLNRKW GNSNIACGEL VLFPYCAHQE 420 DLATYQRWTT QDTVAVADVF FSVNSPSIFR LRYGWFSLAE LEAGLSEISL TRFENCMIPE 480 DIQVKSSSEA CVQKDGTLPS DFTSEQSSNN SKDQSALLLG TPSSTGKNAA EEPSINTFPS 540 QSGDHNQEQV PANQAFEVDP QMDCLAISEV DWADTLTDIS VGYLLTEASK AANLDCEVTS 600 IAKNPLFDEN PCSYDSFDAA VALHASRYQA AEQPAQTSHS TMWGAEETCD EFSFMLATAR 660 KQQGLNTSAS SPPDSDNEVH SSNSEGFQGF LQDLAGGDTP GNPCADDVKA MEELCARSPP 720 QSDNDFGLKD QPLDDAFWPE SLGPLDLDIP PIRSLADEFI LGDSQNSWSR MMENSMDAFR 780 NMSFFVSDNN DSVLPPIM

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

FLQIPNSPIS KFPQTVENFV PDRNLLAALP DRHHEKSRDI CAANVMEKEV YEEMSPPPQP  60
VDLPDATPPS ASDPSQKPAK KATRQWAAWT RQEEESFFNA LRQVGKNFEK ITLRVQSKNK  120
DQVRHYYYRL VRRMKKLLGP GFSLDARNSK DTIAAMLRWW SLLEKFSCSA SKLHLKPRRF  180
KTFVDALGNQ LIKDRKRTRR KCSLGDTRLS SSSPVLSKTP GNQSFAVGLL PMDAQNGSKG  240
ASSKGAFMKR VAESNSNKSG VIRGDLSATR TVRQKRRAGG AGACAAYKKW ERAAMAGVSL  300
VADAAEELER KMTTQNLSCN ADATVLASSP NNVSTVDDAG TNHMKEADPQ APSKLKLQLF  360
PINEATRKAL EKDDHNPHLE LTLSSKKKMS SVLEHLNRKW GNSNIACGEL VLFPYCAHQE  420
DLATYQRWTT QDTVAVADVF FSVNSPSIFR LRYGWFSLAE LEAGLSEISL TRFENCMIPE  480
DIQVKSSSEA CVQKDGTLPS DFTSEQSSNN SKDQSALLLG TPSSTGKNAA EEPSINTFPS  540
QSGDHNQEQV PANQAFEVDP QMDCLAISEV DWADTLTDIS VGYLLTEASK AANLDCEVTS  600
IAKNPLFDEN PCSYDSFDAA VALHASRYQA AEQPAQTSHS TMWGAEETCD EFSFMLATAR  660
KQQGLNTSAS SPPDSDNEVH SSNSEGFQGF LQDLAGGDTP GNPCADDVKA MEELCARSPP  720
QSDNDFGLKD QPLDDAFWPE SLGPLDLDIP PIRSLADEFI LGDSQNSWSR MMENSMDAFR  780
NMSFFVSDNN DSVLPPIM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	1e-163	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG040390.1