PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG040470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 243aa MW: 25297 Da PI: 6.509

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG040470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H TRIDC4BG040470.3 78 FTCNYCQRKFFSSQALGGHQNAH 100 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MKSSSVQEAC EDQLSEISSQ AASNNNEASN TSSRPKLALD LSLTVTAAAA AAATATAESS 60 TTDSNGGPQA AREPTRVFTC NYCQRKFFSS QALGGHQNAH RRERTLARRA VHRLEAYPYG 120 YADVASLPLY GSPGLYPIGI QAHASALPGA AAAAQAERQQ HQQQDAAVLA ATPARARALL 180 GPMPFLVGGD EEVSFGWPGS FRPPPPSAGV LPLLHSGPNF GSSSGSGSIV VQADEEPDLT 240 LRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	1e-19	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG040470.3