PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG040760.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 233aa MW: 25710.1 Da PI: 7.7058

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG040760.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.6e-15	23	69	2	48
SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 + WT+eEd+ll + v++ Gg+ +W++I r ++ gR k+c++rw ++l TRIDC4BG040760.1 23 KMWTKEEDDLLREQVRRCGGPhNWDSICRGLP-GRNSKSCRLRWCQHL 69 67****************************.*********9986 PP
2	Myb_DNA-binding	43.7	6.2e-14	78	120	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T +Ed l+v++ + +G++ W+tIa + gRt++ +k+rw+++ TRIDC4BG040760.1 78 PFTIQEDMLIVKYQATYGNR-WSTIADFLS-GRTDNAVKNRWNSV 120 8999**************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MMPTSGNDAG ACDGDGSPHG VKKMWTKEED DLLREQVRRC GGPHNWDSIC RGLPGRNSKS 60 CRLRWCQHLD PRVEAVKPFT IQEDMLIVKY QATYGNRWST IADFLSGRTD NAVKNRWNSV 120 LRKRQEHAPS QQGQTRPWAP SAARQAAGPE VTPRCLPLFP GSAEEVSEAD TSAAARKCLD 180 LFPLAPGDIR ADVDAAAPPS DMACGAGDPL TELRLWPAPR VVFDVMPLQA YRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	9e-35	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG040760.1