PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG041630.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 258aa    MW: 28488 Da    PI: 6.9963
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG041630.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.2e-12138186355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4BG041630.10 138 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 186
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MPPSGEMYSP PCSAAGSNGE RSFTAGANPL ALLDHAMDFD EHVLFPMHNA GMQDGVQFYN  60
PTAGGTELSR NMSMEKGLKG GKRKGSGEGS STMHSQEETG AMSQREVSME RAGEKEGDGA  120
SNREDYVHIR AKRGQATNNH SLAERFRREK INERMKHLQD LVPGCNKITG KAMMLDEIIN  180
YVQSLQRQVE FLSMKLSAVS PELSCDLDLQ DVRSMETLNN KELACVYRLL KTQHSSQTDH  240
FASGCSPPPC RSFARRTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.16e-44bHLH family protein