PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG041630.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 228aa    MW: 25305.5 Da    PI: 6.6285
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG041630.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.6e-12133181355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4BG041630.11 133 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 181
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MYSPPCSAAG SNGERSFTAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGT  60
ELSRNMSMEK GLKGGKRKGS GEGSSTMHSQ QEETGAMSQR EVSMERAGEK EGDGASNRED  120
YVHIRAKRGQ ATNNHSLAER FRREKINERM KHLQDLVPGC NKITGKAMML DEIINYVQSL  180
QRQVEFLSMK LSAVSPELSC DLDLQDVRSM ETLNNKELAC VYRLLKTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-44bHLH family protein