PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG041630.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 165aa MW: 18029 Da PI: 7.7086

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG041630.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.8	8.3e-08	132	159	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR++iN+++ L++l+P + TRIDC4BG041630.12 132 NNHSLAERFRREKINERMKHLQDLVPGC 159 58************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MYSPPCSAAG SNGERSFTAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGT 60 ELSRNMSMEK GLKGGKRKGS GEGSSTMHSQ EETGAMSQRE VSMERAGEKE GDGASNREDY 120 VHIRAKRGQA TNNHSLAERF RREKINERMK HLQDLVPGCN KITGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	6e-24	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG041630.12