PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG041630.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 228aa    MW: 25299.6 Da    PI: 7.1501
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG041630.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.6e-123785355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4BG041630.6 37 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 85
                      58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MSQREVSMER AGEKEGDGAS NREDYVHIRA KRGQATNNHS LAERFRREKI NERMKHLQDL  60
VPGCNKITGK AMMLDEIINY VQSLQRQVEF LSMKLSAVSP ELSCDLDLQD ILCPQDAHST  120
FPGYGQRLGN VHPNNNMYRA SQPGLSRPEL YGNGIIIPNP ASVHMARTAQ QLSAFPQRSI  180
LWDEELGNVG PAAFPSDVVG TSSLENSGRF RASLHCVSSY APVQCCVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-45bHLH family protein