PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG041630.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 308aa    MW: 33687.7 Da    PI: 5.998
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG041630.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-12132180355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4BG041630.8 132 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 180
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MYSPPCSAAG SNGERSFTAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGT  60
ELSRNMSMEK GLKGGKRKGS GEGSSTMHSQ EETGAMSQRE VSMERAGEKE GDGASNREDY  120
VHIRAKRGQA TNNHSLAERF RREKINERMK HLQDLVPGCN KITGKAMMLD EIINYVQSLQ  180
RQVEFLSMKL SAVSPELSCD LDLQDILCPQ DAHSTFPGYG QRLGNVHPNN NMYRASQPGL  240
SRPELYGNGI IIPNPASVHM ARTAQQLSAF PQRSILWDEE LGNVGPAAFP SDVVGTSSLE  300
NSDSMKVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.31e-43bHLH family protein