PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 347aa MW: 39567.4 Da PI: 5.0322

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	102.5	3.7e-32	1	91	3	102
HHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 3 lkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 l+k+y++++d+++++++sw+++gnsfv++d + f++++L+++Fkh+nf+SF+RQLn+YgF+kv+ ++ we++++ F +g+k+ll+ TRIDC4BG042140.3 1 LTKVYDMVSDAATDKVMSWTDTGNSFVIWDAHAFERDLLSRHFKHRNFSSFIRQLNTYGFRKVDPDR---------WEWANEGFLRGQKHLLK 84 589***********************************************************999.........************* PP XXXXXXX CS HSF_DNA-bind 96 kikrkks 102 ikrkk+ TRIDC4BG042140.3 85 IIKRKKR 91 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
LTKVYDMVSD AATDKVMSWT DTGNSFVIWD AHAFERDLLS RHFKHRNFSS FIRQLNTYGF 60 RKVDPDRWEW ANEGFLRGQK HLLKIIKRKK RPQEAGRELE KAPVKAAPGT ENIEIGRYGG 120 LVKEVETLKR DKALLMKQLV DLRLYQQSSN LEVQSLIQRL QVMEQNQKQM MALLAIVVQN 180 PSLLNQLVQQ QQQQRRNNCV YEDGNKKRRF PALEQGPVTD HETSGAGAEI IQYRPPVPET 240 SSQVIADEAF LSATAQPISS PALNMPMDID TQTTSDNLNT QGSSGDIFAD MPALPDFEDM 300 HLWFNEDGEP TLTIQDYDES PQSGQDCQME AQHNYNYPQH VDAITEA

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

LTKVYDMVSD AATDKVMSWT DTGNSFVIWD AHAFERDLLS RHFKHRNFSS FIRQLNTYGF  60
RKVDPDRWEW ANEGFLRGQK HLLKIIKRKK RPQEAGRELE KAPVKAAPGT ENIEIGRYGG  120
LVKEVETLKR DKALLMKQLV DLRLYQQSSN LEVQSLIQRL QVMEQNQKQM MALLAIVVQN  180
PSLLNQLVQQ QQQQRRNNCV YEDGNKKRRF PALEQGPVTD HETSGAGAEI IQYRPPVPET  240
SSQVIADEAF LSATAQPISS PALNMPMDID TQTTSDNLNT QGSSGDIFAD MPALPDFEDM  300
HLWFNEDGEP TLTIQDYDES PQSGQDCQME AQHNYNYPQH VDAITEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	9e-61	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042140.3