PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042180.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 665aa MW: 71694.5 Da PI: 6.8387

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042180.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90	2.1e-28	184	237	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl TRIDC4BG042180.3 184 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 237 79*****************.******************************8 PP
2	Myb_DNA-binding	39.7	1.2e-12	186	236	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+ lG + +k+I + m+ g+t++++ s++qk++ TRIDC4BG042180.3 186 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 236 678**********************************************97 PP
3	Response_reg	57.1	1e-19	24	108	26	109
EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++++++++ al++l+e++ +D+i+ D+ mp+m+G++ll+ e++lp+i+++a + +++ + +k Ga d+l Kp+ +eel + TRIDC4BG042180.3 24 ATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKN 108 5789999*****999999***************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 665 aa Download sequence
MLLYPIYVTV LFSAPLYDPF FCAATTCSQA TRALAMLREN RGAFDVIISD VHMPDMNGFR 60 LLELVGLEMD LPVIMMSADS RTDLVMKGIK HGACDYLIKP VRMEELKNIW QHVVRKKFGG 120 NKEHEHSGSL DDTDRNRLTN NDNEYASSAN DGAEDSWKSQ KKKRDKEEDD SELESGDPSN 180 NSKKPRVVWS VELHQQFVNA VNHLGIDKAV PKKILELMNV PGLTRENVAS HLQKFRLYLK 240 RIAQHHAGMT NPYGVPASSA QVASLGGLDF QALAASGQIP PQALAALQDE LLGRPTNSLV 300 LPGRDQSSLR LAAVKGNKPH GEQIAFGQPI YKVQNNSYAA LPQNSSAVGR MPSFSAWPNN 360 KLGMSDSMSA LGNVNNSQNS NMVLHELQQQ PDTMLSGTLH TLDVKPSGIV MPSQSLNTFP 420 ASEGLSPNQN SLIIPSQSSG FLTGIPPSMK PELVLPTSQS SNSLLGGIDL INQASTSQPF 480 ISSHGGNLPG LMNRNSNVMS SQGISSFQTG NTPYLVNQNP MGVGSKPPGV LKTESTDSLN 540 QSYAYANHID SGLLSSQSKN AQFGFLQSPN DVTGGWSSFQ NMDGYRNTVG PSQPVSSSSS 600 FQSSNAALGK LPDQGRGKNL GFVGKGTCIP NRFAVDEIES PTNSLSHSIG SSGDIPDMFG 660 FSGQM

Sequence ? help Back to Top

Protein Sequence Length: 665 aa Download sequence

MLLYPIYVTV LFSAPLYDPF FCAATTCSQA TRALAMLREN RGAFDVIISD VHMPDMNGFR  60
LLELVGLEMD LPVIMMSADS RTDLVMKGIK HGACDYLIKP VRMEELKNIW QHVVRKKFGG  120
NKEHEHSGSL DDTDRNRLTN NDNEYASSAN DGAEDSWKSQ KKKRDKEEDD SELESGDPSN  180
NSKKPRVVWS VELHQQFVNA VNHLGIDKAV PKKILELMNV PGLTRENVAS HLQKFRLYLK  240
RIAQHHAGMT NPYGVPASSA QVASLGGLDF QALAASGQIP PQALAALQDE LLGRPTNSLV  300
LPGRDQSSLR LAAVKGNKPH GEQIAFGQPI YKVQNNSYAA LPQNSSAVGR MPSFSAWPNN  360
KLGMSDSMSA LGNVNNSQNS NMVLHELQQQ PDTMLSGTLH TLDVKPSGIV MPSQSLNTFP  420
ASEGLSPNQN SLIIPSQSSG FLTGIPPSMK PELVLPTSQS SNSLLGGIDL INQASTSQPF  480
ISSHGGNLPG LMNRNSNVMS SQGISSFQTG NTPYLVNQNP MGVGSKPPGV LKTESTDSLN  540
QSYAYANHID SGLLSSQSKN AQFGFLQSPN DVTGGWSSFQ NMDGYRNTVG PSQPVSSSSS  600
FQSSNAALGK LPDQGRGKNL GFVGKGTCIP NRFAVDEIES PTNSLSHSIG SSGDIPDMFG  660
FSGQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	5e-92	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042180.3