PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 612aa    MW: 67500.4 Da    PI: 4.8527
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM531.1e-16271531128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                        lp+G +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  
  TRIDC4BG042540.10  27 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 109
                        699************.667777666553454432..2233322233338899******.667788999*****9987755333..3...335 PP

                NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        W+++g +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.10 110 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 153
                        ************.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    
PQAPGRCEAT PAPEGIGGAA QQSWPGLPRG AQFNPSDSDL LWHLAAEMGN GLAHRHPFIS  60
EFIKYGDEGA RFGCTHPRDM PGMRQDGHAL HFFHKKVNLH NNENDKDISW QKSGPSRSII  120
LDGGLQGCKE IFALYAFKNS PQRTDWELHQ YHIKNTMENE GELVLSKIFY KSQKCHCECA  180
SKAPVQSAQD NSVTDDDSKE KEGAQLEKLS VNMATESNFV EGNGNNREQM LVEMYPDQDK  240
PCSLKHVLDT ADVNHENQIN DQAETELDHM SLQERYRILL ADMRSCSARV SAEKCALNDM  300
GNSSMQMDAE TSGPVPKSES EEINHGGTTY RECSVNGKEI PVEDTEGPVN DKAFNSSAEL  360
LLSQTPACGD ENVQLAPRNS GTYLVDVKTE PALDGCAIYP SESPSVKFHH SNNNGLKVSG  420
SLLECVPKDA EDSLPSLGVK SELSGYELPG LCENSFISSM EPIVKKPHTR TLNCNGGLAP  480
CSRQRNKRDS SEKVLEEDGY KNDEGIPYPS RQKRKKKTAT DSIETALEED APGLLQILLD  540
KGIVVKEIKL YDVVEDDEML PDCTESDFQD LENVITKLFP QRTSLLKSVA KHGKGGKAIY  600
CLACLISLIE QV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1483488RQRNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.17e-37NAC family protein