PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.17

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 769aa MW: 86196.9 Da PI: 4.9903

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.17	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.5	1.6e-16	22	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+G +F+P+d++l+ +L++++ + + +e+ik d ++P+d+p ++++ + ++fF+k+ + +++++ + + TRIDC4BG042540.17 22 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 104 699**********.667777666553454432..2233322233338899**.667788999*9987755333..3...335 PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 W+++g +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.17 105 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 148 ********.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
RCEATPAPEG IGGAAQQSWP GLPRGAQFNP SDSDLLWHLA AEMGNGLAHR HPFISEFIKY 60 GDEGARFGCT HPRDMPGMRQ DGHALHFFHK KVNLHNNEND KDISWQKSGP SRSIILDGGL 120 QGCKEIFALY AFKNSPQRTD WELHQYHIKN TMENEGELVL SKIFYKSQKC HCECASKAPV 180 QSAQDNSVTD DDSKEKEGAQ LEKLSVNMAT ESNFVEGNGN NREQMLVEMY PDQDKPCSLK 240 HVLDTADVNH ENQINDQAET ELDHMSLQER YRILLADMRS CSARVSAEKC ALNDMGNSSM 300 QMDAETSGPV PKSESEEINH GGTTYRECSV NGKEIPVEDT EGPVNDKAFN SSAELLLSQT 360 PACGDENVQL APRNSGTYLV DVKTEPALDG CAIYPSESPS VKFHHSNNNG LKVSGSLLEC 420 VPKDAEDSLP SLGVKSELSG YELPGLCENS FISSMEPIVK KPHTRTLNCN GGLAPCSRQR 480 NKRDSSEKVL EEDGYKNDEG IPYPSRQKRK KKTATDSIET ALEEDAPGLL QILLDKGIVV 540 KEIKLYDVVE DDEMLPDCTE SDFQDLENVI TKLFPQRTSL LKSVAKHGKG GKAIYCLACL 600 ISLIEQSRYL QFRDCPVEWG WCRDLQSFIF VFKSHNRLVL ERPEYGYATY FFEILQSVPI 660 EWQIRRMVTA MKLSSCGRTA LIENRPLLIG EDLSEGEAKV LQEYGWIPNT GLGTLLNYRD 720 RVVHDRWNEK YSTDWRMKIG KLLMNGYSEG ELIITHVPLN SEEIKLENP

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

RCEATPAPEG IGGAAQQSWP GLPRGAQFNP SDSDLLWHLA AEMGNGLAHR HPFISEFIKY  60
GDEGARFGCT HPRDMPGMRQ DGHALHFFHK KVNLHNNEND KDISWQKSGP SRSIILDGGL  120
QGCKEIFALY AFKNSPQRTD WELHQYHIKN TMENEGELVL SKIFYKSQKC HCECASKAPV  180
QSAQDNSVTD DDSKEKEGAQ LEKLSVNMAT ESNFVEGNGN NREQMLVEMY PDQDKPCSLK  240
HVLDTADVNH ENQINDQAET ELDHMSLQER YRILLADMRS CSARVSAEKC ALNDMGNSSM  300
QMDAETSGPV PKSESEEINH GGTTYRECSV NGKEIPVEDT EGPVNDKAFN SSAELLLSQT  360
PACGDENVQL APRNSGTYLV DVKTEPALDG CAIYPSESPS VKFHHSNNNG LKVSGSLLEC  420
VPKDAEDSLP SLGVKSELSG YELPGLCENS FISSMEPIVK KPHTRTLNCN GGLAPCSRQR  480
NKRDSSEKVL EEDGYKNDEG IPYPSRQKRK KKTATDSIET ALEEDAPGLL QILLDKGIVV  540
KEIKLYDVVE DDEMLPDCTE SDFQDLENVI TKLFPQRTSL LKSVAKHGKG GKAIYCLACL  600
ISLIEQSRYL QFRDCPVEWG WCRDLQSFIF VFKSHNRLVL ERPEYGYATY FFEILQSVPI  660
EWQIRRMVTA MKLSSCGRTA LIENRPLLIG EDLSEGEAKV LQEYGWIPNT GLGTLLNYRD  720
RVVHDRWNEK YSTDWRMKIG KLLMNGYSEG ELIITHVPLN SEEIKLENP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	478	483	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	4e-36	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.17