PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 423aa    MW: 47126.7 Da    PI: 4.8798
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM545.8e-17171431128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                        lp+G +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  
  TRIDC4BG042540.19  17 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DIS 99 
                        699************.667777666553454432..2233322233338899******.667788999*****9987755333..3...335 PP

                NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        W+++g +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.19 100 WQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 143
                        ************.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
DTAPTLSCPA YLSWPGLPRG AQFNPSDSDL LWHLAAEMGN GLAHRHPFIS EFIKYGDEGA  60
RFGCTHPRDM PGMRQDGHAL HFFHKKVNLH NNENDKDISW QKSGPSRSII LDGGLQGCKE  120
IFALYAFKNS PQRTDWELHQ YHIKNTMENE GELVLSKIFY KSQKCHCECA SKAPVQSAQD  180
NSVTDDDSKE KEGAQLEKLS VNMATEMISF PGNGNNREQM LVEMYPDQDK PCSLKHVLDT  240
ADVNHENQIN DQAETELDHM SLQERYRILL ADMRSCSARV SAEKCALNDM GNSSMQMDAE  300
TSGPVPKSES EEMYGSFLAV YDFICVTLIN VLFCNVGYRN HGGTTYRECS VNGKEIPVED  360
TEGPVNDKAF NSSAELLLSQ TPACGDENVQ LAPRNSGTYL VDVKTEPALD GLWFSSGMCA  420
KRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.16e-38NAC family protein