PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042540.23

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 445aa MW: 49327.9 Da PI: 5.2337

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042540.23	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	40.1	1.1e-12	36	115	41	128
NAM 41 kvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++P+d+p ++++ + ++fF+k+ + +++++ + + W+++g +++++ +g l g+k+++++y + ++++++tdW +h+y++ TRIDC4BG042540.23 36 CTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISWQKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 115 68****.667788999*9987755333..3...335********.999*******.5677779*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
DLLWHLAAEM GNGLAHRHPF ISEFIKYGDE GARFGCTHPR DMPGMRQDGH ALHFFHKKVN 60 LHNNENDKDI SWQKSGPSRS IILDGGLQGC KEIFALYAFK NSPQRTDWEL HQYHIKNTME 120 NEGELVLSKI FYKSQKCHCE CASKAPVQSA QDNSVTDDDS KEKEGAQLEK LSVNMATESN 180 GNNREQMLVE MYPDQDKPCS LKHVLDTADV NHENQINDQA ETELDHMSLQ ERYRILLADM 240 RSCSARVSAE KCALNDMGNS SMQMDAETSG PVPKSESEEI NHGGTTYREC SVNGKEIPVE 300 DTEGPVNDKA FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL DGCAIYPSES 360 PSVKFHHSNN NGLKVSGSLL ECVPKDAEDS LPSLGVKSEL SGYELPGLCE NSFISSMEPI 420 VKKPHTRTLN CNGGLAPCSR QRNKR

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

DLLWHLAAEM GNGLAHRHPF ISEFIKYGDE GARFGCTHPR DMPGMRQDGH ALHFFHKKVN  60
LHNNENDKDI SWQKSGPSRS IILDGGLQGC KEIFALYAFK NSPQRTDWEL HQYHIKNTME  120
NEGELVLSKI FYKSQKCHCE CASKAPVQSA QDNSVTDDDS KEKEGAQLEK LSVNMATESN  180
GNNREQMLVE MYPDQDKPCS LKHVLDTADV NHENQINDQA ETELDHMSLQ ERYRILLADM  240
RSCSARVSAE KCALNDMGNS SMQMDAETSG PVPKSESEEI NHGGTTYREC SVNGKEIPVE  300
DTEGPVNDKA FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL DGCAIYPSES  360
PSVKFHHSNN NGLKVSGSLL ECVPKDAEDS LPSLGVKSEL SGYELPGLCE NSFISSMEPI  420
VKKPHTRTLN CNGGLAPCSR QRNKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	440	445	RQRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	6e-28	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042540.23