PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042540.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 728aa    MW: 81314.3 Da    PI: 5.041
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042540.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.61.5e-16281541128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                       lp+G +F+P+d++l+  +L++++ +        +  +e+ik  d       ++P+d+p  ++++ + ++fF+k+ + +++++   +   +  W
  TRIDC4BG042540.9  28 LPRGAQFNPSDSDLL-WHLAAEMGNGLahrhpfI--SEFIKYGDegarFGCTHPRDMP-GMRQDGHALHFFHKKVNLHNNEND--K---DISW 111
                       699************.667777666553454432..2233322233338899******.667788999*****9987755333..3...335* PP

               NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++g +++++  +g l g+k+++++y + ++++++tdW +h+y++
  TRIDC4BG042540.9 112 QKSGPSRSIIL-DGGLQGCKEIFALY-AFKNSPQRTDWELHQYHI 154
                       ***********.999***********.5677779*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
SPQAPGRCEA TPAPEGIGGA AQQSWPGLPR GAQFNPSDSD LLWHLAAEMG NGLAHRHPFI  60
SEFIKYGDEG ARFGCTHPRD MPGMRQDGHA LHFFHKKVNL HNNENDKDIS WQKSGPSRSI  120
ILDGGLQGCK EIFALYAFKN SPQRTDWELH QYHIKNTMEN EGELVLSKIF YKSQKCHCEC  180
ASKAPVQSAQ DNSVTDDDSK EKEGAQLEKL SVNMATESNG NNREQMLVEM YPDQDKPCSL  240
KHVLDTADVN HENQINDQAE TELDHMSLQE RYRILLADMR SCSARVSAEK CALNDMGNSS  300
MQMDAETSGP VPKSESEEIN HGGTTYRECS VNGKEIPVED TEGPVNDKAF NSSAELLLSQ  360
TPACGDENVQ LAPRNSGTYL VDVKTEPALD GCAIYPSESP SVKFHHSNNN GLKVSGSLLE  420
CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC NGGLAPCSRQ  480
RNKRDSSEKV LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL LQILLDKGIV  540
VKEIKLYDVV EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK GGKAIYCLAC  600
LISLIEQSRY LQFRDCPVEW GWCRDLQSFI FVFKSHNRLV LERPEYGYAT YFFEILQSVP  660
IEWQIRRMVT AMKLSSCGRT ALIENRPLLI GEDLSEGEAK VLQEYGWIPN TGLGTLLNYR  720
DRVVHDRW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1479484RQRNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.13e-36NAC family protein