PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042950.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 227aa MW: 25927.1 Da PI: 6.2471

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	65.4	5.7e-21	1	39	13	51
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 f+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+ss TRIDC4BG042950.1 1 FAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 39 89***********************************96 PP
2	K-box	90.4	3.4e-30	62	151	10	99
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 a++e +q++ kLk ++e L+++qR++lGedL++Ls+keL+q+e+q++ slk+iR++Kn++ll+++ +l+ ke+elq++nk+Lrkkl+ TRIDC4BG042950.1 62 PLAENEINYQQYLKLKTRLEYLESSQRNILGEDLGPLSMKELEQIENQIDISLKHIRTRKNKVLLDELYDLKSKEQELQDQNKNLRKKLQ 151 4456677899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
FAKRRNGLLK KAYELSLLCD AEVALIIFSG RGRLFEFSSS SCMYKTLERY RTCNCNSQEA 60 TPLAENEINY QQYLKLKTRL EYLESSQRNI LGEDLGPLSM KELEQIENQI DISLKHIRTR 120 KNKVLLDELY DLKSKEQELQ DQNKNLRKKL QDTSCAENAL HMAWQDAGQC SSSGHVIDTT 180 YSGLVQHPEH DSSVQVGYNN QAYVDQPNNE DMASQRLHGL GSSAGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	3e-60	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042950.1