PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 215aa    MW: 24163.9 Da    PI: 9.6953
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY134.41.4e-41191661162
             YABBY   1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesas 93 
                       +d++s se++Cyv+C++Cnt+lav vP + l+ +vtv+CGhC +l  ++ +    +++ + +            ++  ++ +   +  +++ +
  TRIDC4BG042970.2  19 MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPPMVQPLSPN------------DH--HHPMGPFQGCTDCRR 97 
                       578999*************************************9866444444444444443............22..223333344444444 PP

             YABBY  94 tsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                       ++      s  +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  TRIDC4BG042970.2  98 NQPLPPLASPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 166
                       33333333566778899**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
ATHRRKRPIV RWLASMQSMD LVSPSEHLCY VRCTYCNTVL AVGVPCKRLM DTVTVKCGHC  60
NNLSFLSPRP PPMVQPLSPN DHHHPMGPFQ GCTDCRRNQP LPPLASPTSS DASPRAPFVV  120
KPPEKKHRLP SAYNRFMREE IQRIKAAKPD IPHREAFSMA AKNWAKCDPR CSSTVSASNS  180
APEPRIVVPG PQLQERATEQ VVESFDIFKQ MERST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.15e-52YABBY family protein