PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG042970.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 162aa MW: 18298 Da PI: 9.687

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG042970.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	23.1	2.2e-07	15	37	1	23
YABBY 1 advfssseqvCyvqCnfCntila 23 +d++s se++Cyv+C++Cnt+la TRIDC4BG042970.3 15 MDLVSPSEHLCYVRCTYCNTVLA 37 578999***************98 PP
2	YABBY	91.3	2.5e-28	54	113	103	162
YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa TRIDC4BG042970.3 54 PTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 113 4566788999*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
RKRPIVRWLA SMQSMDLVSP SEHLCYVRCT YCNTVLAGCT DCRRNQPLPP LASPTSSDAS 60 PRAPFVVKPP EKKHRLPSAY NRFMREEIQR IKAAKPDIPH REAFSMAAKN WAKCDPRCSS 120 TVSASNSAPE PRIVVPGPQL QERATEQVVE SFDIFKQMER ST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	2e-30	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG042970.3