PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG042970.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 127aa    MW: 14095.1 Da    PI: 8.8744
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG042970.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY95.51.2e-292989102162
             YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                       s  +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  TRIDC4BG042970.5  29 SPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 89 
                       556677899*9*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MTTTTPWGRS RDMGCTDCRR NQPLPPLASP TSSDASPRAP FVVKPPEKKH RLPSAYNRFM  60
REEIQRIKAA KPDIPHREAF SMAAKNWAKC DPRCSSTVSA SNSAPEPRIV VDMIDTECLS  120
ACNIHGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.17e-28YABBY family protein