PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG043400.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 246aa    MW: 28134.8 Da    PI: 7.2545
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG043400.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.82.5e-15241081298
                       HTT-EE--HHH.HTT---..--SEEEEEE.TTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltled.esg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       +++ l+lp kfa+   g +  +++++l+   sg    W+vk+  +   g+++l++GW++F++a++L+ g f+vF++dg  ++ l+vkvf+
  TRIDC4BG043400.2  24 SLKKLRLPDKFAKVLAGRE--PREVKLREaGSGrrSLWDVKVVLDAD-GHMYLGRGWEQFARAHDLRLGYFLVFSFDG--DAVLTVKVFD 108
                       446699******8888775..5578888844556677*****65555.5778***********************887..5556999997 PP
2B339.41.1e-121612391498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE..E-SS.SEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk..ldgr.sefelvvkvfr 98 
                       + l +p +f e+hg+ +++    +l   sg+sW v+l  + +     ++ GW +F  +n+L +gD++ F+  + ++ ++ el+v+v++
  TRIDC4BG043400.2 161 QYLNVPLEFHEAHGYAQRS---KVLLRMSGKSWPVTL--KHT----AFRYGWHQFLVDNRLTVGDTCFFRalRGSDgEDHELKVQVRK 239
                       56889********998655...466667*********..444....5899********************743355688888888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEEEKAFPID SSGFEFFIIM LSKSLKKLRL PDKFAKVLAG REPREVKLRE AGSGRRSLWD  60
VKVVLDADGH MYLGRGWEQF ARAHDLRLGY FLVFSFDGDA VLTVKVFDMS MCRRHYQRDD  120
DASSGSSSDS SSSAETEVDD APTSQFTIRL SGCNFLEKQQ QYLNVPLEFH EAHGYAQRSK  180
VLLRMSGKSW PVTLKHTAFR YGWHQFLVDN RLTVGDTCFF RALRGSDGED HELKVQVRKL  240
DGSFVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.11e-20B3 family protein