PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG043780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 230aa    MW: 25814.9 Da    PI: 7.6396
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG043780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3352.5e-112524699
                      EEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 46 WevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      W+vk+  +   g+++l++GW++F++a++L+ g f+vF++dg  ++ l+vkvf+ 
  TRIDC4BG043780.1  2 WDVKVVLDAD-GHMYLERGWEQFARAHDLRLGYFLVFSYDG--DAVLTVKVFDV 52
                      9999965555.56789**********************988..55569999985 PP
2B340.93.6e-131302041286
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       +++ l +p +f  +hg+ ++++++l++   +g+sW v l++   +++++r  ++ GW +F+ +n L egD++ F+  +
  TRIDC4BG043780.1 130 QEQYLNVPVDFQLAHGYAERSKVELRM---RGKSWLVHLKHnpkTGGRSRASFRYGWHQFCVDNALGEGDTCFFRALR 204
                       5667899****99**999888766664...67*******997666666669***********************9544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
FWDVKVVLDA DGHMYLERGW EQFARAHDLR LGYFLVFSYD GDAVLTVKVF DVSMCRRHYK  60
HDGDTSTRLF LVLALRFSSE SSSDGDSGSS NTSDGGSGGN NRSLVEMDVE DGPTGQFSAM  120
LRKCNLGMKQ EQYLNVPVDF QLAHGYAERS KVELRMRGKS WLVHLKHNPK TGGRSRASFR  180
YGWHQFCVDN ALGEGDTCFF RALRQGSAGG GGEDHLLKVE VRRRDGSFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.13e-12B3 family protein