PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG043780.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 159aa    MW: 17390.3 Da    PI: 7.983
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG043780.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.31.3e-13581331186
                       HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        +++ l +p +f  +hg+ ++++++l++   +g+sW v l++   +++++r  ++ GW +F+ +n L egD++ F+  +
  TRIDC4BG043780.2  58 KQEQYLNVPVDFQLAHGYAERSKVELRM---RGKSWLVHLKHnpkTGGRSRASFRYGWHQFCVDNALGEGDTCFFRALR 133
                       55677899****99**999888766664...67*******997666666669***********************9544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
GFCIWPGSES SSDGDSGSSN TSDGGSGGNN RSLVEMDVED GPTGQFSAML RKCNLGMKQE  60
QYLNVPVDFQ LAHGYAERSK VELRMRGKSW LVHLKHNPKT GGRSRASFRY GWHQFCVDNA  120
LGEGDTCFFR ALRQGSAGGG GEDHLLKVEV RRRDGSFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31630.16e-08B3 family protein