PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG044560.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 200aa    MW: 21606.3 Da    PI: 10.3661
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG044560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-111251651055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+YIk +q
  TRIDC4BG044560.1 125 RKRREKINERLKVLQNLIPNG-----TKVDISTMLEEAVHYIKFMQ 165
                       9******************97.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
ACKRKFGDQN GTQSDTVAVP KKKARSTVPP VQRKGKSSAQ PKKASKGSCS RGGQEESNGE  60
ANNNVQSSSN YLSDEEGSLE MTSCSNMSSA SKKTSSSRGD HGHGGGAKAR AGRGAATDPQ  120
SLYARKRREK INERLKVLQN LIPNGTKVDI STMLEEAVHY IKFMQLQIKL LSSDDMWMFA  180
PIAYNGFNVG LDLKIAPPQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12026PKKKARS
2125130RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.13e-47bHLH family protein