PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG046550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 311aa    MW: 33178.9 Da    PI: 5.7718
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG046550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP86.12.7e-27132218371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4BG046550.1 132 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEftdpnnnieppdpdnpnaqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 218
                       689*******...*****999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
LLPNSARSRL ISASMVSGVP HRPDENGGGG GPSFPQQPAP VGTPPPSSGP AHSASTSGGS  60
AGGSPSSRSE QQGPAATNGA GPAASTPASD GTAFLRLNNL DINGDDAPSS QAPISIKKKK  120
RRAAAVGPDK GGRGLRQFSM KVCEKVESKG RTTYNEVADE LVAEFTDPNN NIEPPDPDNP  180
NAQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSINDIEEL QADLAGVKGR  240
IEKKSAYLQE LQDQYLGMQN LINRNEQLYG SGNIPSGGVA LPFILIQTRP HATVEVEISE  300
DMQLVHFDFN T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117122KKKKRR
2118123KKKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-108E2F/DP family protein