PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG047780.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 631aa MW: 68938.1 Da PI: 7.7088

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG047780.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	8.2e-12	477	523	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq TRIDC4BG047780.6 477 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 523 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
SAFAGFAVPV HAHRVPAVPA PSATFGHRIL SVLMKTEIEE EGIRGSWTEE DKSLCASVLG 60 LDAFTYLTKG GGAISENLVA ASGLVGLQNK LQDLVEADGK SLCWNYAIFW QLSHTKSGEL 120 VLGWGDGSCR EPHDNEMNST TRGDIHDASS LSQQRMRKRV LERLHTAFAG AEEEDDALRI 180 DQVTDTELFF LASMYFAFPR HVGGPGQVFA TGAPLWIPNN PHKVSPSNYC YRGFLASAAG 240 FRTIVLLPFE AGVLELGSMQ NVLESAEALE TIRSVFLGAS SKKAASGKHD ENGSAQISPG 300 LAKIFGKDLN LSRPLVNTGA LPLKMNERSW DMQKNCGGES LLLPNVRKGL QNFTWSQARG 360 LNSHHQKFGN GILVVKSETS QRSNGAAHSP GLSPFQLQNS QQILTQPPPQ SQTPRHIDFS 420 VGSSSKSGVL TSQAALLGGE NGSVDGLCKE QVAPTMEGQQ PRKRGRKPAN GRVEALNHVE 480 AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITHIT DLQKKLKEME SERDMFLESG 540 MVDRRVQTPR PEVDIQVVQD EVLVRVMSPM DNYPINNVFQ AFEEAEVKVG ESKIASNNGK 600 VMHSFVIKSP GSEQQTREKL IAAMSRAMNS M

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

SAFAGFAVPV HAHRVPAVPA PSATFGHRIL SVLMKTEIEE EGIRGSWTEE DKSLCASVLG  60
LDAFTYLTKG GGAISENLVA ASGLVGLQNK LQDLVEADGK SLCWNYAIFW QLSHTKSGEL  120
VLGWGDGSCR EPHDNEMNST TRGDIHDASS LSQQRMRKRV LERLHTAFAG AEEEDDALRI  180
DQVTDTELFF LASMYFAFPR HVGGPGQVFA TGAPLWIPNN PHKVSPSNYC YRGFLASAAG  240
FRTIVLLPFE AGVLELGSMQ NVLESAEALE TIRSVFLGAS SKKAASGKHD ENGSAQISPG  300
LAKIFGKDLN LSRPLVNTGA LPLKMNERSW DMQKNCGGES LLLPNVRKGL QNFTWSQARG  360
LNSHHQKFGN GILVVKSETS QRSNGAAHSP GLSPFQLQNS QQILTQPPPQ SQTPRHIDFS  420
VGSSSKSGVL TSQAALLGGE NGSVDGLCKE QVAPTMEGQQ PRKRGRKPAN GRVEALNHVE  480
AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAITHIT DLQKKLKEME SERDMFLESG  540
MVDRRVQTPR PEVDIQVVQD EVLVRVMSPM DNYPINNVFQ AFEEAEVKVG ESKIASNNGK  600
VMHSFVIKSP GSEQQTREKL IAAMSRAMNS M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-131	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG047780.6