PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG047950.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 157aa    MW: 18100.8 Da    PI: 10.5073
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG047950.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.81.2e-275099251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva++ifs  g+l+e+ss
  TRIDC4BG047950.5 50 RIENKTTRQVTFTKRRNGLLKKAYELSLLCDAEVALVIFSGGGRLFEFSS 99
                      8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
VRERERLEHR ASKAYDQTSL CWRQEVTGER ERKGGRGRRK MGRGKVEIRR IENKTTRQVT  60
FTKRRNGLLK KAYELSLLCD AEVALVIFSG GGRLFEFSSS SWYVTKPTLS VHLLFPSLLV  120
SLDLCVRQDL VKQNSDFLAF SSINQEHEKT SLFCVTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.19e-26MIKC_MADS family protein