PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG047990.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 275aa    MW: 32217.4 Da    PI: 5.7414
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG047990.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind80.82.2e-2527124102
                       SSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
      HSF_DNA-bind  24 ngnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
                        gnsfvv+d++ fa  +Lp++Fkhsnf+SFvRQLn+YgF+k++ ++         weF+++ F +g+++ll+ ikr++s
  TRIDC4BG047990.3   2 AGNSFVVWDPHLFAAVLLPRFFKHSNFSSFVRQLNTYGFRKIDPDR---------WEFANEGFIRGQRQLLKMIKRRRS 71 
                       589****************************************999.........*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
RAGNSFVVWD PHLFAAVLLP RFFKHSNFSS FVRQLNTYGF RKIDPDRWEF ANEGFIRGQR  60
QLLKMIKRRR SLSYLPSSQH QALGSCLEVG QFGFDEEIEV LKRDKNALLA EVVKLRQEQQ  120
SSRADMRAME ERLHHVEQKQ LQMMGFLARA IQNPDFFLQL IQQQDKLKDL EDGYPTKRRR  180
PIDVMPFLGP EGTSQSEPLE STFIFEDREF SELENLAMNI QGIRKGMEHD RGGRNQGCGE  240
AELTDDFWEE LLSEGMRDEA EILELERRRS RYVDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16369LKMIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-67HSF family protein