PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG049770.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 242aa    MW: 26120.1 Da    PI: 8.9421
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG049770.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.51.1e-33133189158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4BG049770.5 133 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 189
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
FCIPLAENGT IMIQFGQQVP NCESSASDSP QEVSGMSEGS FNEQNDQSGN RDGYTKSDEG  60
KMMSALSLGN SETAYTPPKP DRTHPFAISY PYADPYYGGA VAAYGTHAIM HPQMVGMVPS  120
SRVPLPIEPA AAEEPIYVNA KQYHAILRRR QLRAKLEAEN KLVKSRKPYL HESRHQHAMK  180
RARGTGGRFL NAKEKSEAAS GGGNASARSG HAGVPTDGGG MFSKHDHTLP SGDFHYRARG  240
GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-36NF-YA family protein