PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG049770.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 204aa    MW: 22158 Da    PI: 10.2369
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG049770.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.98.1e-3495151158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4BG049770.6  95 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 151
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
EALMSRMINL GNRDGYTKSD EGKMMSALSL GNSETAYTPP KPDRTHPFAI SYPYADPYYG  60
GAVAAYGTHA IMHPQMVGMV PSSRVPLPIE PAAAEEPIYV NAKQYHAILR RRQLRAKLEA  120
ENKLVKSRKP YLHESRHQHA MKRARGTGGR FLNAKEKSEA ASGGGNASAR SGHAGVPTDG  180
GGMFSKHDHT LPSGDFHYRA RGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.12e-36NF-YA family protein