PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG049930.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 656aa MW: 76124.3 Da PI: 7.3204

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG049930.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	5.9e-18	46	131	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ leHnH+++p TRIDC4BG049930.11 46 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQFSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLEHNHPISP 131 5************9998887.7888************9998...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
APDEEDEDAF IVEEIGDSSD DRQAEPTVML EPKKGMMFSS EDDAVRFYKA YARKKGFGVI 60 RRTTRHGEDK MLTYFTLACN RQGKAQFSAK NSFKPNPSTR MQCPAKSNFS RRGENFCITT 120 VTLEHNHPIS PSKARFLRCH KKVDLHSKRR LELNDQAGAR MNTNFGSPVM EAGNLEFGEK 180 ECTNYLQEKR SLKLGAGDAH ALYQYFLRMQ SKDPAFFHVM DVAEDGRLRN VFWADARSRA 240 AYESYWDVIT FDTTYLTNKY RIPLATFVGV NHHGESVLLG CGLLSNEDTE TFVWLFKSWL 300 CCMSCKPPNA IVTDQCKPMQ NAIEEVFPQA RHRWCTCHIM KKIPENLSGY ENIKSSLSNV 360 VYDSLTKHGF DKAWVEMINK YDLQDNEWLA GLYDNKNLWV PAYVKDTFWA GMSSTKRSES 420 VNAFFDGYVN ARTTLKQFVE QYENALREKV EKENKADSKS FQEQIPCITH YDFERQFQAA 480 YTTAKFKEFQ DQLRGKIYCY PTQLNKEGSV FTFGVREDSK IFCEGEDGKR KEKRVILEFI 540 VLFNQGECDV QCMCRLFEFR GILCSHIISV LALMEITDVP SRYILQRWRK DIKRKHTFVR 600 CFYDDMIDTQ VVQRYDNLCK HSHEVAENGA ESDALHDLVM DGLNELQRKI DAYRAR

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

APDEEDEDAF IVEEIGDSSD DRQAEPTVML EPKKGMMFSS EDDAVRFYKA YARKKGFGVI  60
RRTTRHGEDK MLTYFTLACN RQGKAQFSAK NSFKPNPSTR MQCPAKSNFS RRGENFCITT  120
VTLEHNHPIS PSKARFLRCH KKVDLHSKRR LELNDQAGAR MNTNFGSPVM EAGNLEFGEK  180
ECTNYLQEKR SLKLGAGDAH ALYQYFLRMQ SKDPAFFHVM DVAEDGRLRN VFWADARSRA  240
AYESYWDVIT FDTTYLTNKY RIPLATFVGV NHHGESVLLG CGLLSNEDTE TFVWLFKSWL  300
CCMSCKPPNA IVTDQCKPMQ NAIEEVFPQA RHRWCTCHIM KKIPENLSGY ENIKSSLSNV  360
VYDSLTKHGF DKAWVEMINK YDLQDNEWLA GLYDNKNLWV PAYVKDTFWA GMSSTKRSES  420
VNAFFDGYVN ARTTLKQFVE QYENALREKV EKENKADSKS FQEQIPCITH YDFERQFQAA  480
YTTAKFKEFQ DQLRGKIYCY PTQLNKEGSV FTFGVREDSK IFCEGEDGKR KEKRVILEFI  540
VLFNQGECDV QCMCRLFEFR GILCSHIISV LALMEITDVP SRYILQRWRK DIKRKHTFVR  600
CFYDDMIDTQ VVQRYDNLCK HSHEVAENGA ESDALHDLVM DGLNELQRKI DAYRAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-126	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG049930.11