PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG049930.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 361aa MW: 41750.8 Da PI: 6.3303

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG049930.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.4	2.3e-18	62	147	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ leHnH+++p TRIDC4BG049930.5 62 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQFSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLEHNHPISP 147 5************9998887.7888************9998...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEPDLTLDEV AEQNRSAPDE EDEDAFIVEE IGDSSDDRQA EPTVMLEPKK GMMFSSEDDA 60 VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQFSAKNSFK PNPSTRMQCP 120 AKSNFSRRGE NFCITTVTLE HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNTN 180 FGSPVMEAGN LEFGEKECTN YLQEKRSLKL GAGDAHALYQ YFLRMQSKDP AFFHVMDVAE 240 AWVEMINKYD LQDNEWLAGL YDNKNLWVPA YVKDTFWAGM SSTKRSESVN AFFDGYVNAR 300 TTLKQFVEQY ENALREKVEK ENKADSKSFQ EQIPCITHYD FERQFQAAYT TAKFKEFQDQ 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEPDLTLDEV AEQNRSAPDE EDEDAFIVEE IGDSSDDRQA EPTVMLEPKK GMMFSSEDDA  60
VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQFSAKNSFK PNPSTRMQCP  120
AKSNFSRRGE NFCITTVTLE HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNTN  180
FGSPVMEAGN LEFGEKECTN YLQEKRSLKL GAGDAHALYQ YFLRMQSKDP AFFHVMDVAE  240
AWVEMINKYD LQDNEWLAGL YDNKNLWVPA YVKDTFWAGM SSTKRSESVN AFFDGYVNAR  300
TTLKQFVEQY ENALREKVEK ENKADSKSFQ EQIPCITHYD FERQFQAAYT TAKFKEFQDQ  360
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-30	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG049930.5