PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG051140.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LSD

Protein Properties

Length: 68aa MW: 7226.38 Da PI: 6.483

Description

LSD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG051140.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-LSD1	25.9	1.7e-08	47	68	1	22
zf-LSD1 1 CggCrtlLsYPrGApsVRCalC 22 C+ C+ +L+YP GApsV+ a+C TRIDC4BG051140.4 47 CHRCQRVLAYPSGAPSVCGAMC 68 ********************** PP

Sequence ? help Back to Top
Protein Sequence Length: 68 aa Download sequence
MELLVHQGEH GPLEGVRGPE AHLQILPLPK GEGNETGCTC MQSQIVCHRC QRVLAYPSGA 60 PSVCGAMC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32540.1	1e-06	LSD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG051140.4