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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC4BG051420.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | B3 | ||||||||
| Protein Properties | Length: 244aa MW: 27433.3 Da PI: 8.4588 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 51.8 | 1.4e-16 | 143 | 233 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
f k +++s+v + +l lp +f++++ k ++ t+tl de+ +++e k+ ++++ l++GW +F+ ++ +++gD+ vF+l++ ++f +
TRIDC4BG051420.1 143 FMKRMLHSHVVRGFWLGLPSHFCDTYLPK--NDCTITLVDEKDEEFESKY--LAYKKG--LSGGWAGFALDHVIRDGDSTVFQLIKPTTF--K 227
8999********************99533..4459***************..555555..9***********************986777..9 PP
EEEE-S CS
B3 94 vkvfrk 99
v+++r+
TRIDC4BG051420.1 228 VHIIRA 233
999885 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 244 aa Download sequence |
MAIEKKGMSA YEAERERTVE ENKRKMEALN LRHLSAAVAT YAPKTPSPMK HKRRRIIEAA 60 TPVPSPPRRS RRLAHLPEVK YADACAEVGE DSERVGRWSP RRRSGSIYLA GGGGGPISMK 120 ARMEAASKAE ELESQLDPEF PSFMKRMLHS HVVRGFWLGL PSHFCDTYLP KNDCTITLVD 180 EKDEEFESKY LAYKKGLSGG WAGFALDHVI RDGDSTVFQL IKPTTFKVHI IRAAVGDDDN 240 EEME |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 52 | 56 | KRRRI |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G42700.1 | 2e-47 | B3 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC4BG051420.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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