PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051420.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 240aa    MW: 27058.8 Da    PI: 8.9962
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051420.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.91.4e-16139229199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f k +++s+v +  +l lp +f++++  k  ++ t+tl de+ +++e k+    ++++  l++GW +F+ ++ +++gD+ vF+l++ ++f  +
  TRIDC4BG051420.3 139 FMKRMLHSHVVRGFWLGLPSHFCDTYLPK--NDCTITLVDEKDEEFESKY--LAYKKG--LSGGWAGFALDHVIRDGDSTVFQLIKPTTF--K 223
                       8999********************99533..4459***************..555555..9***********************986777..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v+++r+
  TRIDC4BG051420.3 224 VHIIRA 229
                       999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MAIEKKGMSA YEAERERTVE ENKRKMEALN LRHLSAAVAT YAPKTPSPMK HKRRRIIEAA  60
TPVPSPPRRS RRLAHLPEVK YADVGEDSER VGRWSPRRRS GSIYLAGGGG GPISMKARME  120
AASKAEELES QLDPEFPSFM KRMLHSHVVR GFWLGLPSHF CDTYLPKNDC TITLVDEKDE  180
EFESKYLAYK KGLSGGWAGF ALDHVIRDGD STVFQLIKPT TFKVHIIRAA VGDDDNEEME
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15256KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.18e-49B3 family protein