PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 255aa    MW: 28783.6 Da    PI: 8.4545
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.31.1e-244190251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rien   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s
  TRIDC4BG051550.1 41 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 90
                      8**********************************************986 PP
2K-box43.81.1e-151222011998
             K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                        + a+L++e+ +    + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k  +l een +L+++ 
  TRIDC4BG051550.1 122 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQA 201
                       567888888888888889**********************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
ELLPPPDRRR PPQIYCNTST VGRGTRGERM AGKRERIAIR RIENLAARQV TFSKRRRGLF  60
KKAEELSILC DAEVGLAVFS ATGKLFQFAS SSMNQIIDRY NSHSKILKKA DEPSQLDLHE  120
DSNCARLRDE LAEASLWLQQ MRGEELQSLN VQQLQALEKS LESGLGSVLK TKSQKIMDQI  180
SELERKRVQL IEENARLKEQ ASKMEMQVAA DSPSVYEEGQ SSESVTNTSY PRPPLDTEDS  240
SDTSLRLGLP LYNSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-82MIKC_MADS family protein