PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG051550.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 25720.1 Da    PI: 6.5611
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG051550.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.69.3e-251261251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rien   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s
  TRIDC4BG051550.3 12 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 61
                      8**********************************************986 PP
2K-box45.14.2e-16931731999
             K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        + a+L++e+ +    + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k  +l een +L+++l+
  TRIDC4BG051550.3  93 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQLQ 173
                       567888888888888889************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MAGKRERIAI RRIENLAARQ VTFSKRRRGL FKKAEELSIL CDAEVGLAVF SATGKLFQFA  60
SSSMNQIIDR YNSHSKILKK ADEPSQLDLH EDSNCARLRD ELAEASLWLQ QMRGEELQSL  120
NVQQLQALEK SLESGLGSVL KTKSQKIMDQ ISELERKRVQ LIEENARLKE QLQASKMEMQ  180
VAADSPSVYE EGQSSESVTN TSYPRPPLDT EDSSDTSLRL GLPLYNSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.14e-82MIKC_MADS family protein