PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG051550.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 246aa MW: 27502.1 Da PI: 8.674

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG051550.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	77.4	1.1e-24	28	77	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s TRIDC4BG051550.5 28 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 77 8**********************************************986 PP
2	K-box	44.1	9e-16	109	189	19	99
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + a+L++e+ + + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k +l een +L+++l+ TRIDC4BG051550.5 109 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQLK 189 567888888888888889***********************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
SVAAAATVGR GTRGERMAGK RERIAIRRIE NLAARQVTFS KRRRGLFKKA EELSILCDAE 60 VGLAVFSATG KLFQFASSSM NQIIDRYNSH SKILKKADEP SQLDLHEDSN CARLRDELAE 120 ASLWLQQMRG EELQSLNVQQ LQALEKSLES GLGSVLKTKS QKIMDQISEL ERKRVQLIEE 180 NARLKEQLKL QASKMEMQVA ADSPSVYEEG QSSESVTNTS YPRPPLDTED SSDTSLRLGL 240 PLYNSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-82	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG051550.5