PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG051870.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 228aa MW: 25608.3 Da PI: 11.4824

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG051870.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.8	2.9e-11	118	154	1	39
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.ST CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.ls 39 +rr+h ++Er+RR+++N+ ++ Lr+l+P++ ++++ s TRIDC4BG051870.2 118 QRRTHIAVERNRRRQMNEYLAALRSLMPQS---YAQRnRS 154 79***************************8...5554344 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
SHSQAVNLLP LARARMALEA VVFAQGHFGY GQAPGLAPWC DMVGAGGFLE DWDQQLLAAP 60 VPPNAEDQWE PVSSWDQSEA SSEGKAAAPE PTMAAAATGR RKRRRTKIVK NKEEVESQRR 120 THIAVERNRR RQMNEYLAAL RSLMPQSYAQ RNRSTIAIAA SVLLMLQLER FRASTPRRPS 180 IHRWRGNQLR EGAGAAPPIA RSPKKRQEPH RPIPFRQLLH FPTVLYLV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	105	RKRRR
2	101	106	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	1e-21	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG051870.2