PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG051870.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 310aa MW: 33856.1 Da PI: 7.0647

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG051870.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.9	4.2e-14	103	155	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +rr+h ++Er+RR+++N+ ++ Lr+l+P+ + + a+i+ A++Y+k+L+ TRIDC4BG051870.3 103 QRRTHIAVERNRRRQMNEYLAALRSLMPQsY---ERFRGDQASIVGGAINYVKELE 155 79*************************55...8888*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MALEAVVFAQ GHFGYGQAPG LAPWCDMVGA GGFLEDWDQQ LLAAPVPPNA EDQWEPVSSW 60 DQSEASSEGK AAAPEPTMAA AATGRRKRRR TKIVKNKEEV ESQRRTHIAV ERNRRRQMNE 120 YLAALRSLMP QSYERFRGDQ ASIVGGAINY VKELEQLLQS LEVQKSVKNR IGRSPFASSF 180 TFPQYSTSCN TTQATASDGG SGADSSGVKS EAGVADIEVT MVEGHASLKV LSRRRPKQLL 240 RLVAGLQQLR IPPLHLNVTT VDAMVLYSFS LKVEDGSKLS SVEDIAAAVH EILARIQREE 300 EEAGRLSSSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	90	RKRRR
2	86	91	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	3e-64	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG051870.3